EvoMiner: frequent subtree mining in phylogenetic databases

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EvoMiner: Frequent Subtree Mining in Phylogenetic Databases Technical Report #11-08, Dept. of Computer Science, Iowa State University

The problem of mining collections of trees to identify common patterns, called frequent subtrees (FSTs), arises often when trying to make sense of the results of phylogenetic analysis. FST mining generalizes the well-known maximum agreement subtree problem. Here we present EvoMiner, a new algorithm for mining frequent subtrees in collections of phylogenetic trees. EvoMiner is an Apriori-like le...

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ژورنال

عنوان ژورنال: Knowledge and Information Systems

سال: 2013

ISSN: 0219-1377,0219-3116

DOI: 10.1007/s10115-013-0676-0